genewise output
Score 134.59 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000633_2.0    1 MVYVSN                          QVLDSRSRSPWSLSFLT 
                     MVYVSN                          QVLDSRS+SPW +SF+  
                     MVYVSN          G:G[ggt]        QVLDSRSQSPWRMSFVV 
OMLM01000630.1: 1215 agtgtaGGTGAGTG  Intron 1   CAGGTcgcgaaactctcattgg 
                     ttatca <1-----[1234 : 1793]-1>  attagggaccggtcttt 
                     ggcgcc                          gcgccgcgaagagttga 


SPP00000633_2.0   25 DFFWGAVEFIGL                          FQTLVQPDLSK 
                     D+FWGAVEFI L                          F+T+ QPD++K 
                     DLFWGAVEFIRL           F:F[ttt]       FKTMFQPDMTK 
OMLM01000630.1: 1847 gcttggggtaatTTGTAAGTA  Intron 2   CAGTtaaatccgaaa 
                     attggctattgt  <2-----[1885 : 2321]-2> tacttacatca 
                     tccggaggccga                          tgagtgtcgag 


SPP00000633_2.0   49 DGNNSASSRFSDGR                          PPGFPG-RR 
                     DG ++ S RFSDGR                          PPG PG RR 
                     DGRSNPS-RFSDGR           G:G[ggg]       PPGPPGGRR 
OMLM01000630.1: 2356 ggcaact cttggaGGGTAAGTC  Intron 3   CAGGccgccggaa 
                     agggacc gtcagg  <2-----[2397 : 2878]-2> ccgccgggg 
                     tgcttaa ccttca                          tatcttcag 


SPP00000633_2.0   72 RMGRINHGAGPTPPPMGGGG                              
                     RMGRI HGAGP PPPMGGGG                              
                     RMGRITHGAGPNPPPMGGGG                              
OMLM01000630.1: 2907 cagaaacgggcacccagggg                              
                     gtggtcagcgcaccctgggg                              
                     ggaaacttatactaagtaaa                              


//
Making a G in phase 1 intron
Making a F in phase 2 intron
Making a G in phase 2 intron
>OMLM01000630.1:subseq(0,10617).pep
MVYVSNGQVLDSRSQSPWRMSFVVDLFWGAVEFIRLFFKTMFQPDMTKDGRSNPSRFSDG
RGPPGPPGGRRRMGRITHGAGPNPPPMGGGG
//
>OMLM01000630.1:subseq(0,10617).[1215:2966].sp
ATGGTGTACGTGTCCAACGGTCAGGTCCTGGACAGCAGGAGCCAGTCACCATGGCGAATG
TCTTTTGTGGTAGATCTCTTCTGGGGGGCAGTGGAGTTCATCAGGTTATTTTTTAAGACA
ATGTTTCAGCCTGACATGACAAAGGATGGGCGCAGTAATCCATCACGCTTCTCTGATGGC
AGAGGGCCTCCAGGTCCCCCTGGTGGCAGAAGGCGGATGGGAAGAATAACCCATGGTGCA
GGTCCAAACCCTCCACCAATGGGTGGAGGAGGA
//
OMLM01000630.1:subseq(0,10617)	GeneWise	match	1215	2966	134.59	+	.	OMLM01000630.1:subseq(0,10617)-genewise-prediction-1
OMLM01000630.1:subseq(0,10617)	GeneWise	cds	1215	1233	0.00	+	0	OMLM01000630.1:subseq(0,10617)-genewise-prediction-1
OMLM01000630.1:subseq(0,10617)	GeneWise	intron	1234	1793	0.00	+	.	OMLM01000630.1:subseq(0,10617)-genewise-prediction-1
OMLM01000630.1:subseq(0,10617)	GeneWise	cds	1794	1884	0.00	+	2	OMLM01000630.1:subseq(0,10617)-genewise-prediction-1
OMLM01000630.1:subseq(0,10617)	GeneWise	intron	1885	2321	0.00	+	.	OMLM01000630.1:subseq(0,10617)-genewise-prediction-1
OMLM01000630.1:subseq(0,10617)	GeneWise	cds	2322	2396	0.00	+	1	OMLM01000630.1:subseq(0,10617)-genewise-prediction-1
OMLM01000630.1:subseq(0,10617)	GeneWise	intron	2397	2878	0.00	+	.	OMLM01000630.1:subseq(0,10617)-genewise-prediction-1
OMLM01000630.1:subseq(0,10617)	GeneWise	cds	2879	2966	0.00	+	1	OMLM01000630.1:subseq(0,10617)-genewise-prediction-1
//